CODEXIS, INC.

Class 001: Enzymes for scientific and research purposes

Reagents and enzymes for use in the manufacture of enzymatic catalyzed oligonucleotides for scientific and research use

RNA manufacturing services for others utilizing proprietary enzymatic technologies to enable nucleic acid therapeutics development; "SYNTHESIS"

Reagents and enzymes for use in the manufacture of enzymatic catalyzed oligonucleotides for scientific and research use

Licensing of technology for the manufacture and enzymatic synthesis of oligonucleotides; Reagents and enzymes for use in the manufacture of enzymatic catalyzed oligonucleotides for scientific and research use

Downloadable or recorded computer software used to populate data collected from protein evolution experiments; Downloadable or recorded software for archiving, storing, and tracking biological protein samples

Downloadable or recorded computer software that utilizes sequencing and activity data to determine the effect of mutations on proteins in various environments for the purpose of accelerating protein engineering analysis, and for predicting the outcome of interactions between pairs of mutations in a protein library

Downloadable or recorded computer software that collects, identifies, and processes next-generation barcoded sequencing data of protein mutations and displays the results in a graphical user interface

Downloadable or recorded computer software that uses protein sequencing, activity and 3D structural data for protein library design and analysis, which assists in protein engineering; Downloadable or recorded software that aids in interpretation of large protein engineering data sets

Downloadable or recorded computer software that provides visualization tools for use in monitoring and analyzing protein evolution for research and scientific analysis

Downloadable or recorded computer software used in analyzing, managing and visualizing DNA sequencing data; Downloadable or recorded software for use in identifying genetic mutations

Downloadable or recorded computer software used to search and identify highly optimized proteins from protein libraries and analyze the resulting data, for research and scientific analysis

Downloadable or recorded computer software for the storage and searching of screening data for enzymes and substrates for use in research and scientific analysis

Downloadable or recorded computer software for use in the analysis of protein sequence homology for use in research and scientific analysis

Downloadable or recorded computer software that facilitates the creation of oligonucleotide sequences encoding genetic mutations for use in research and scientific analysis

biomanufacturing in the nature of directed evolution services, namely, recombination of genes, proteins and enzymes for the benefit of others to produce novel gene sequences, proteins and enzymes for use in scientific and medical research, and industrial and commercial applications in the fields of chemistry, pharmaceuticals, biotherapeutics, and food and beverages; manufacture of chemicals for others; chemicals for use in research in industry and science; chemicals for use in the manufacture of products for commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for in vitro scientific and research use; chemicals and biochemicals for use in the manufacture of products for commercial use; enzymes used to produce chemicals for research; enzymes used to produce chemicals for use in the manufacture of products for commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for use in the synthesis of pharmaceuticals and chemicals; chemical and biochemical catalysts for use in pharmaceutical and chemical production; biochemistry research and product development for others, namely, custom design and development of highly optimized proteins and enzymes for use in the fields of scientific and medical research, industry and commercial applications; chemical research services; scientific research services; research, product development, and related process development services for others in the fields of chemistry, pharmaceuticals, biotherapeutics, and food and beverages

biomanufacturing in the nature of directed evolution services, namely, recombination of genes, proteins and enzymes for the benefit of others to produce novel gene sequences, proteins and enzymes for use in scientific and medical research, and industrial and commercial applications in the fields of chemistry, pharmaceuticals, biotherapeutics, and food and beverages; manufacture of chemicals for others; chemicals for use in research in industry and science; chemicals for use in the manufacture of products for commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for in vitro scientific and research use; chemicals and biochemicals for use in the manufacture of products for commercial use; enzymes used to produce chemicals for research; enzymes used to produce chemicals for use in the manufacture of products for commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for use in the synthesis of pharmaceuticals and chemicals; chemical and biochemical catalysts for use in pharmaceutical and chemical production; "PROTEIN ENGINEERING EXPERTS"; biochemistry research and product development for others, namely, custom design and development of highly optimized proteins and enzymes for use in the fields of scientific and medical research, industry and commercial applications; chemical research services; scientific research services; research, product development, and related process development services for others in the fields of chemistry, pharmaceuticals, biotherapeutics, and food and beverages

directed evolution services, namely, the recombination of genes for the benefit of others to produce novel gene sequences for use in science, research, chemistry, and medicine; manufacture of chemicals for others; chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for in vitro scientific, research and commercial use; enzymes used to produce chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for use in the synthesis of pharmaceuticals and chemicals; chemical and biochemical catalysts for use in pharmaceutical and chemical production; chemical research services; scientific research services; research, product development, and process development services for others in the fields of chemistry, pharmaceuticals, and biocatalysis

Enzymes, reagents and buffers on plates with multi-well arrays that act as biochemical catalysts for scientific and research applications pertaining to chemical, pharmaceutical, and medical industries; enzymes, reagents and buffers for scientific or research purposes

directed evolution services for others, namely, the custom manufacture of microorganisms and genes for use in the production of chemicals, biochemicals, enzymes, chemical catalysts, and biochemical catalysts for use in scientific research, medical research, and industrial uses pertaining to chemistry, industrial chemicals, pharmaceuticals, and medicine; manufacturing services for others in the fields of enzymes, microorganisms, chemicals, biochemicals, chemical catalysts, and biochemical catalysts; chemical research services, excluding chemical research related to laboratory animals; scientific research services, excluding scientific research related to laboratory animals; research, product development, and process development services for others in the fields of chemistry, industrial chemicals, pharmaceuticals, medicine, and biocatalysis, excluding research, product development, and process development services related to laboratory animals

"BIOCATALYSIS"

"BIOCATALYSIS"

Enzymes, reagents and buffers on plates with multi-well arrays that act as biochemical catalysts for scientific and research applications pertaining to chemistry, pharmaceutical, and medicine industries; enzymes, reagents and buffers for scientific or research purposes

Directed evolution services, namely, the development of microorganisms and genes for the benefit of others to produce chemicals, biochemicals, enzymes, chemical catalysts, and biochemical catalysts for use in scientific research, medical research, and industrial uses pertaining to chemistry, [ biofuels, renewable fuels, ] industrial chemicals, pharmaceuticals, medicine [, carbon capture, and water treatment ]; manufacturing services for others in the fields of enzymes, microorganisms, [ biofuels, renewable fuels, ] chemicals, biochemicals, chemical catalysts, and biochemical catalysts; Chemical research services; scientific research services; research, product development, and process development services for others in the fields of chemistry, [ biofuels, renewable fuels, ] industrial chemicals, pharmaceuticals, medicine, [ carbon capture, water treatment, ] and biocatalysis

"SUGAR"

biochemicals, enzymes, and biochemical catalysts, all for scientifc, research, and industrial uses

directed evolution services, namely, the development of microorganisms and genes for the benefit of others to produce chemicals, biochemicals, enzymes, and biocatalysts for use in scientific research, medical research, and commercial applications pertaining to chemistry, [bio-fuels, renewable fuels,] industrial chemicals, pharmaceuticals, and medicine

biochemical catalysts for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; enzymes used to produce chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine

[ directed evolution services, namely, the custom manufacture of chemicals, biochemicals, enzymes, and biocatalysts for use in scientific research, medical research, and commercial applications pertaining to chemistry, pharmaceuticals, industrial chemicals, and biofuels ]; chemicals, biochemicals, enzymes, and biocatalysts for use in scientific research, medical research, and commercial applications pertaining to chemistry, pharmaceuticals, industrial chemicals [, and biofuels ]; [ chemical research services; scientific research services; research, product development, and process development services for others in the fields of chemistry, pharmaceuticals, industrial chemicals, and biofuels ]

"BIOCATALYST PANEL"

"DIAGNOSTIC PANEL"

"KRED PANEL"

"PANEL"

Process development services for others in the fields of chemistry, pharmaceuticals, and biocatalysts

Chemicals, namely, enzymes for use in the manufacture of pharmaceuticals and medicine; enzymes for in vitro scientific, research and commercial use; enzymes used to produce chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for use in the synthesis of pharmaceuticals; chemical and biochemical catalysts for use in pharmaceutical and chemical production

directed evolution services, namely, the recombination of genes for the benefit of others to produce novel gene sequences for use in science, research, chemistry, and medicine; manufacture of chemicals for others; chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for in vitro scientific, research and commercial use; enzymes used to produce chemicals for research and commercial applications pertaining to chemistry, pharmaceuticals, and medicine; chemicals and biochemicals for use in the synthesis of pharmaceuticals and chemicals; chemical and biochemical catalysts for use in pharmaceutical and chemical production; chemical research services; scientific research services; research, product development, and process development services for others in the fields of chemistry, pharmaceuticals, and biocatalysis

DIRECTED EVOLUTION SERVICES, NAMELY THE RECOMBINATION OF GENES FOR THE BENEFIT OF OTHERS TO PRODUCE NOVEL GENE SEQUENCES FOR USE IN SCIENCE, RESEARCH, CHEMISTRY, AGRICULTURE, MEDICINE AND INDUSTRY; CHEMICAL RESEARCH SERVICES; SCIENTIFIC RESEARCH SERVICES; RESEARCH AND TESTING SERVICES IN THE FIELDS OF BACTERIOLOGY AND VIROLOGY; RESEARCH AND PRODUCT DEVELOPMENT SERVICES FOR OTHERS IN THE FIELDS OF GENETICS AND GENE THERAPY, TRANSGENIC PLANTS, CHEMISTRY, PHARMACEUTICALS, MEDICAL DIAGNOSTICS, HERBICIDES, PESTICIDES, BIOPESTICIDES, CYTOTOXIC AGENTS, BACTERIOLOGY, VIROLOGY, BIOCATALYSIS, METABOLIC PATHWAYS, AND BIOCHEMICAL PATHWAYS, AND OTHER UTILITIES